• New training module
• Updated documentation
• Miscellaneous bug fixes

For a full list, please see https://github.com/CBICA/CaPTk/issues?q=is%3Aissue+is%3Aclosed

Issues

https://github.com/CBICA/CaPTk/issues

Versions

• Fixes to Preprocessing
  • NIfTI to DICOM writing improvements
  • Registration improvements (rigid and deformable added to CLI and GUI)
  • Bias correction improvements
• Added functionality in Utilities
  • Label statistics (generic and BraTS-specific)
  • Casting fixes
  • BVEC reorientation
• Fixes to Feature Extraction
• Fixes to a lot of brain-cancer applications:
  • PCA calculation
  • Perfusion derivatives fixes
  • Diffusion derivatives
  • Survival fixes
  • Recurrence fixes
  • Pseudoprogression fixes
• Generic GUI bug fixes and improvements
• Added apply mask functionality from drawing panel
• Headers added to csv features files for multiple applications
• Fixed application font mismatch on GUI
• Fixed mask opacity change functionality from comparison mode
• Added Collage radiomic features to Feature Extraction module
• Documentation updates

• New model and data for Pseudo-Progression Estimator
• Generic bug fixes and improvements
• Documentation updates

• GUI improvements
• Algorithmic fixes for Neuro applications
• Better error handling added all around
• Linux installation updates
• Generic bug fixes and improvements

• Light/Dark mode and font switcher
• Lots of new Utilities (NIfTI to DICOM & DICOM-Seg object conversion, Orientation change, Thresholding, File format conversion)
• New functions to deal with image "series" (extraction and joining)
• Automated Docker builds
• Generic bug fixes and improvements

• Preferences dialog added (see File > Preferences)
• DICOM reading updates on the GUI
• DeepMedic runtime fixes
• Comparison mode works on 2 images
• Generic bug fixes and improvements

• Better high DPI support for all supported platforms
• Updated documentation for whole package
• Generic bug fixes and improvements

• New Applications and Tools
  • Perfusion Alignment
  • Deep Learning Inference Engine based on DeepMedic
  • Native DICOM ingestion
  • Preprocessing and Utilities added to create pipelines
  • Spherical drawing
• Updates
  • New Feature Families and image resampling added to Feature Extraction Panel
  • Packaging improvements for macOS and Linux
  • Updated "--help" for CLI applications
  • CI/CD integration
  • Comparison mode view
  • Training Module improvements
  • Annotation visualization improvements (single/multiple label view)

• Generic bug fixes in several applications
• Feature Extraction fixes on par with IBSI
• OpenGL rendering added to better handle scaling issues
• New "Preprocessing" executable added which has a bunch of generic functionality

• New applications have been added: Lung Cancer Segmentation/Analysis, Pseudo-Progression, EGFRvIII-SVM, Training Module, DeepMedic Segmentation, Greedy Registration
• Updates to Feature Extraction Panel (Lattice-based computation, new feature families)
• macOS package has been added
• Lots of bug-fixes and improvements

• New applications added: Perfusion derivatives (ap-rCBV, PSR, PH), Diffusion derivatives (FA, AX, RAD, TR), PCA Volume Extraction, GBM Molecular Subtype Prediction, GBM Population Atlas
• Performance and UI improvements
• New user-centric documentation & intro, based on NIH/ITCR guidelines
• DICOM to NIfTI conversion
• Complete integration of WhiteStripe in the CaPTk UI (batch via CLI)
• Updated implementation of Directionality Estimation
  

• Labels updated to support GLISTR and GLISTRboost outputs
• Added a way to invoke CaPTk from the command line to make QC of multiple subjects easier
• Double click to add tissue points and tumor point centers
• New applications added
• Performance and UI improvements

• New applications added
• Interactive functionality updated
• Added central core for statistical analyses
• Bug fixes

• Added functionality to drawing
• Documentation updated with more illustrative screenshots

• Updated documentation outside and inside the application
• Random bug-fixes

• First public release of CaPTk_Full (version 1.0.0)
• Applications populated using highlighted algorithms from CBICA
• Feature Panel added to generate a comprehensive radiomic feature set for training
• More optimizations and bug-fixes in interaction

• Release for MICCAI 2016
• UI optimizations
• Seed point selector updated

• Move to a date-based versioning system for more clarity and coherence
• SeedSelector version for GLISTR, GLISTRboost, PORTR added to compilation
• Major UI overhaul with more dynamic elements

• Bug fixes in the seed points are saved
• Generic interactive improvements

• First (internal) release of CaPTk
• Mostly a prototype at this stage
• Interactive elements (seed-point initialization, ROI drawing) work properly
• Image loading for NIfTI and DICOM works
• Some applications have been added to the compilation for testing

Contact software@cbica.upenn.edu for questions, etc.