Installation
MRISnapshot can be installed using pip. We suggest that users install the package in a Conda environment or Python3 virtual environment:
1. Installation in a Conda environment using pip
conda create -n mrisnapshot python=3.8 conda activate mrisnapshot conda install pip pip install mrisnapshot
2. Installation in a Python3 virtual environment using pip
virtualenv -p python3 mrisnapshot source mrisnapshot/bin/activate pip install mrisnapshot
3. Installation in a Conda environment from Github repository
git clone https://github.com/CBICA/MRISnapshot cd MRISnapshot conda create -n mrisnapshot python=3.8 conda activate mrisnapshot conda install pip pip install -r requirements.txt pip install .
4. Check the installation
mrisnapshot_prep_data -h mrisnapshot_create_report -h